Dr Stefania Cerretelli
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- Qualifications:
BSc, MSc, PhD, FHEA
- Biography:
Dr Stefania Cerretelli obtained the Bachelor Degree in Natural Science, and the Master Degree in Environmental Biology at the University of Trieste (Italy) in the 2010 and 2013, respectively. During her Master’s and Bachelor’s Degrees she developed experience in planning and conducting environmental surveys (such as vegetation surveys as well as mammals monitoring).
She obtained a PhD in Ecology at the University of Udine (Italy) and The Hames Hutton Institute (UK) with the title “The role of ecosystem services in the spatial assessment of land degradation: a transdisciplinary study in the Ethiopian Great Rift Valley”. Her PhD was part of the ALTER (Alternative Carbon Investments in Ecosystems for Poverty Alleviation) project, a three years international and interdisciplinary project funded by ESPA (Ecosystem Services for Poverty Alleviation) with partners from UK, Ethiopia, and Uganda.
For her PhD, she mapped the landscape capacity to supply ecosystem services (carbon storage, soil retention, and nutrient retention) integrating data from global datasets, as well as soil properties data from a local survey, and a supervised land use classification. Moreover, she developed and implemented a participatory approach (through single interviews, focus group discussions, and participatory mapping) that involved local stakeholders. The spatial data and the local participatory knowledge and information were finally integrated in a spatialised Bayesian Belief Network model to map land degradation risk in several land use scenarios.
She joined the Natural Resources Institute in July 2019 as a research fellow for the project “Sustainability-Intensification Trade-offs in Coffee Agroforestry in Central America”, to work on ecosystem services modelling through GIS techniques. She also worked and still work identifying relationship and trade-offs between productivity and biophysical aspects (e.g. soil characteristics, shade management, biodiversity). She became Senior Lecturer in April 2023 and she is involved in teaching, tutoring and supervising activities for the BSc on Environmental Science and the MSc programmes Global Environmental Change and Agriculture for Sustainable Development.
Since the end of 2023 she is involved in the project “Evaluating the interrelated impacts of commodity agriculture, market access and forest conservation on food security in tropical landscape” where conservation efforts, markets access and commodity agriculture are analysed to infer how they affect rural livelihoods and poverty.
Throughout her career, Dr Stefania Cerretelli gained good knowledge of and experience on Remote Sensing techniques and GIS-based systems (e.g. GRASS, QGIS, and ArcGIS), programming and statistical analysis skills including BBN statistics (mainly using R-Cran Software), good skills in managing large sets of data.
During her academic career she worked with important academics in her own field: Jeremy Haggar, Truly Santika, Alessandro Gimona, Laura Poggio, Helaina Black, Rolando Cerda
- Selected Publications:
- Santika, T., Nelson, V., Flint, M., MacEwen, M., Cerretelli, S., and Brack, D. (2024) Leverage points for tackling unsustainable global value chains: market-based measures versus transformative alternatives. Sustainability Science, 19, pp. 285–305. (doi:https://doi.org/10.1007/s11625-023-01430-0)
- Cerretelli, S., Castellanos E., González-Mollinedo S., López E., Ospina A., and Haggar J. (2023) A scenario modelling approach to assess management impacts on soil erosion in coffee systems in Central America. Catena, 228, 107182. (doi:https://doi.org/10.1016/j.catena.2023.107182)
- Katic, P.G., Cerretelli, S., Haggar, J., Santika, T., and Walsh, C. (2023). Mainstreaming biodiversity in business decisions: taking stock of tools and gaps.. Biological Conservation, 277(8), 109831. (doi:https://doi.org/10.1016/j.biocon.2022.109831)
- van Oijen, M., Haggar, J., Barrios, M., Büchi, L., Cerda, R., Cerretelli, S., López, E., de Melo Virginio Filho, E., and Ospina, A. (2022) Ecosystem services from coffee agroforestry in Central America: Estimation using the CAF2021 model. Agroforestry System, 96, pp. 969-981. (doi:https://doi.org/10.1007/s10457-022-00755-6)
- Cerretelli, S., Poggio, L., Yakob, G., Boke, S., Habte, M., Peressotti, A., Black, H., and Gimona, A. (2021) The advantages and limitations of global datasets to assess carbon stocks as proxy for land degradation in an Ethiopian case study. Geoderma, 399, 115117. (doi:https://doi.org/10.1016/j.geoderma.2021.115117)
- Haggar, J., Casanoves, F., Cerda, R., Cerretelli, S., González-Mollinedo, S., Lanza, G., López, E., Leiva, B., and Ospina, A. (2021) Shade and agronomic intensification in coffee agroforestry systems: trade-off or synergy?. Frontiers in Sustainable Food Systems, 5, 645958. (doi:https://doi.org/10.3389/fsufs.2021.645958)
- Cerretelli, S., Poggio, L., Gimona, L., Yakob, G., Boke, S., Habte, M., Peressotti, A., and Black, H. (2018) Spatial assessment of land degradation through key ecosystem services: The role of globally available data. Science of the Total Environment, 628–629, pp. 539–555. (doi:https://doi.org/10.1016/j.scitotenv.2018.02.085)
- Research / Scholarly Interests:
Her main research interest is in identifying trade-offs between different ecological as well as socio-economic aspects within different agro-ecosystems. Methods that help achieving sustainability without compromising communities’ resilience and adaptation to environmental changes are her main research focus.
She is interested in the integration of remote sensing data and field data to model important environmental factors and ecosystem services (soil retention, carbon storage, water yield); these models are an important means to inform decision-making processes that could help supporting the adoption of better management to foster a sustainable development without depleting ecosystem services. Another interest of Dr Stefania Cerretelli is to integrate biophysical data and stakeholders’ knowledge to gain a better perspective of the study area. This is important to assess different trade-offs between sustainability, agriculture productions, livelihood diversification, as well as other factors such as poverty eradication and well-being.
- Teaching Programmes:
She is involved in teaching mainly at BSc level, leading two modules under the BSc Environmental Science programme: Environmental Management and Environmental Impact Assessment. She is deputy programme leader of MSc Global Environmental Change and she supervises students under this programme and MSc Agriculture for Sustainable development for their final independent project.
- Research Projects:
Dr Stefania Cerretelli has been associated to the following Funded Research Projects.
ALTER project - Alternative Carbon Investments in Ecosystems for Poverty Alleviation (2013-2017).
ALTER aimed to demonstrate the benefits for wide scale poverty alleviation by tackling soil degradation, from field to landscape, by carrying out studies in Ethiopia and Uganda, bringing together natural scientists, social scientists - along with local communities and decision makers - to improve our understanding of how human-environment linked systems respond to incentives and other change.
The project was an international consortium between The James Hutton Institute (UK), University of Aberdeen (UK), Hawassa University (Ethiopia), The Ethiopian Government's Southern Agricultural Research Institute (SARI, Ethiopia), Carbon Foundation for East Africa (CAFEA, Uganda) and the International Water Management Institute (Nile Basin & Eastern Africa Office, Ethiopia).
For the above-mentioned project, Stefania mapped the distribution of ecosystem services and the integration of social and economic aspects with the environmental factors in affecting the land degradation.
SEACAF - Sustainability-Intensification Trade-offs in Coffee Agroforestry in Central America (2019-2022)
“Sustainability-Intensification Trade-offs in Coffee Agroforestry in Central America” was a BBSRC/GCRF funded project with partners from Costa Rica (CATIE - The Tropical Agricultural Research and Higher Education Centre) and Guatemala (Universidad del Valle de Guatemala). Coffee agri-systems vary from intensive monoculture plantations to forest-like coffee agroforests and therefore provide a model system to evaluate the trade-offs and potential synergies between intensification and sustainability. Coffee agri-systems of Costa Rica where production has been more intensive even within agroforestry systems, and Guatemala where traditional coffee agroforestry systems predominate are compared. Provisioning, supporting and indicators of regulating ecosystem services are evaluated on around 80-90 coffee farms in each country representing different typologies of coffee production with a range of intensity of production (levels of fertilizer use) and sustainability (levels of shade trees). The results of this project will inform the best strategies and support for farmers to enable sustainable productive livelihoods while meeting the product demands of markets and environmental demands of society.
FAM-ESCR - Evaluating the interrelated impacts of commodity agriculture, market access and forest conservation on food security in tropical landscape (2023-2025)
The FAM-ESRC is an UKRI funded project with partners from Indonesia (Hasanuddin University, University of Papua, and National Research and Innovation Agency). This project aims to analyse the interrelated impacts of various forest conservation schemes and agricultural production models on food security and how this interacts with access to markets. The main objective of the project is to evaluate how forest conservation programmes (protected area and community-based land management), market accessibility, and commodity agriculture development (industrial-scale monocultures and polyculture and agroforestry smallholdings) collectively affect and impact rural livelihoods and food security.
Multiple secondary datasets from government censuses and remote sensing from four major islands of Indonesia (Sumatra, Kalimantan, Sulawesi, and Papua) will be used. This research will be able to compare food security in different stages of economic development in different islands. The project will primarily involve desk analysis of secondary datasets; we will also conduct two workshops in Indonesia to obtain feedback from stakeholders on the results and interpretations of the analysis.
Nature based solutions for climate resilience of local and indigenous communities in Guatemala (2024-2027)
This project is funded by DEFRA UK for 3 years. It has local Guatemalan partners (specifically Universidad del Valle and FEDECOVERA, as well as CATIE in Costa Rica), and will assess nature-based solutions in two different areas in Guatemala (Alta Verapaz and Chiquimula).
Scientific and traditional local and Indigenous knowledge systems will be integrated in the design and assessment of nature-based solutions (NbS) to enhance their impact on the climate resilience and just wellbeing of rural communities in two regions of Guatemala. Local and national decision-makers will use guidelines and tools that integrate local and Indigenous Peoples’ values, knowledge and culture in the co-design of NbS for landscape climate resilience. Individual people, households and communities will be empowered to be at the centre of NbS planning and implementation through an enhanced awareness of the current and potential role of ecosystems in their lives and of the factors required for NbS to result in just and successful outcomes. The tools and evidence from application of this approach will be made available to inform landscape resilience planning across Central America.
- Greenwich Academic Literature Archive (GALA) link:
https://gala.gre.ac.uk/view/authors/7393.html
- Responsibilities:
NRI Representative at the ECR network for the Faculty of Engineering and Science
- External Profiles:
ORCID
https://orcid.org/0000-0003-3652-7253
LinkedIn
https://www.linkedin.com/in/stefania-cerretelli-91907282/
Google Scholar
https://scholar.google.com/citations?user=Hj1LhFgAAAAJ&hl=it
Research Gate
https://www.researchgate.net/profile/Stefania_Cerretelli
Phone: +44 (0)1634 88 3015
Senior Lecturer in Environmental Science
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Stephanie Dyke
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Phone: +44 (0)1634 88 3564
Doctoral Training Manager
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Dr Steven Harte
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- Qualifications:
BSc, PhD, MRSC, MSCI, MRES, FHEA
- Biography:
Steven joined the Chemical Ecology research group as a research fellow within the Natural Resources Institute in 2017. Since then, he has worked on numerous interdisciplinary projects investigating semiochemicals for use in integrated pest management and improving pollination services. Recently Steven has also moved into biopesticide research, such as entomopathogenic fungi, using his natural product expertise to identify and isolate bioactive metabolites. All areas of his research are focused on attempting to reduce reliance on traditional agrochemical interventions and thus make agriculture more sustainable.
This interest was informed by his experience working as a Natural Product Chemist for 5 years at the small biotech firm Hypha Discovery (https://www.hyphadiscovery.com/), where he was responsible for isolating novel bioactive metabolites from bacterial and fungal strains as part of a drug discovery methodology.
Over the years Steven has worked closely with the Royal Society of Chemistry and currently sits on both the Kent local section and the agriculture special interest group committees, organising events and STEM outreach activities.
Steven started his career when he received his BSc in Chemistry with mathematics from Keele University in 2007. He followed this by working as an analytical chemist at both Clariant and Sanofi Aventis and was responsible for the quality control analysis for fine pharmaceuticals produced on site.
Steven subsequently started working on utilising small molecule inhibitors of Spliceosomal protein Snu114 at the University of Manchester, under Dr David Berrisford, for which he was received a PhD in biochemistry.
- Selected Publications:
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James, K., Springate, S., Harte, S.J., Farman, D., Colgan, R. and Arnold, S.E. (2024) Buzzing benefits: how multi-species pollination boosts strawberry yield, quality, and nutritional value. Journal of Pollination Ecology, 37(20), pp.326-340. https://doi.org/10.26786/1920-7603(2024)788
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Harte, S.J., Bray, D., Nash-Woolley, V., Stevenson, P., and Fernández-Grandon, M.G. (2024) Antagonistic and additive effect when combining biopesticides against the fall armyworm, Spodoptera frugiperda. Scientific Reports. 14(1), pp. 6029 https://doi.org/10.1038/s41598-024-56599-w
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Hardy, H., Harte, S.J., Hopkins, R., Mnyone, L. and Hawkes, F. (2023) The influence of manure-based organic fertilisers on the oviposition behaviour of Anopheles arabiensis. Acta Tropica, 244:106954, pp. 1-11. https://doi.org/10.1016/j.actatropica.2023.106954
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Sanchez-Gomez, T., Harte, S.J., Zamora, P., Matéo, B., Julio, J.D., Baudilio, H., Niño-Sánchez, J. and Martín-García, J. (2023) Nematicidal effect of Beauveria species and the mycotoxin beauvericin against pinewood nematode Bursaphelenchus xylophilus. Frontiers in Forests and Global Change, 6:1229456, pp. 67-77. https://doi.org/10.3389/ffgc.2023.1229456
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Tungadi, T.D., Shaw, B., Powell, G., Hall, D.R., Bray, D.P., Harte, S.J., Farman, D.I., Wijnen, H. and Fountain, M.T., (2022). Live drosophila melanogaster larvae deter oviposition by drosophila suzukii. Insects, 13(8), pp. 688. https://doi.org/10.3390/insects13080688
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Bray, D.P., Hall, D.R., Harte, S.J., Farman, D.I., Vankosky M.A. and Mori B.A., (2022). Components of the Female Sex Pheromone of the Newly-Described Canola Flower Midge, Contarinia brassicola. Journal of Chemical Ecology, 48, pp. 479–490. https://doi.org/10.1007/s10886-022-01369-z
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Hall, D.R., Harte, S.J., Bray, D.P., Farman, D.I., James, R., Silva, C.X. and Fountain, M.T., (2021). Hero Turned Villain: Identification of Components of the Sex Pheromone of the Tomato Bug, Nesidiocoris tenuis. Journal of Chemical Ecology, pp. 1-12. https://doi.org/10.1007/s10886-021-01270-1
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Hall, D.R., Harte, S.J., Farman, D.I., Ero, M. and Pokana, A., (2021). Identification of Components of the Aggregation Pheromone of the Guam Strain of Coconut Rhinoceros Beetle, Oryctes rhinoceros, and Determination of Stereochemistry. Journal of chemical ecology, 48, pp. 1-13. https://doi.org/10.1007/s10886-021-01329-z
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Fernández-Grandon, G.M., Harte, S.J., Ewany, J., Bray, D. and Stevenson, P.C., (2020). Additive effect of botanical insecticide and entomopathogenic fungi on pest mortality and the behavioral response of its natural enemy. Plants, 9(2), pp. 173. https://doi.org/10.3390/plants9020173
- Research / Scholarly Interests:
Steven is part of the Chemical Ecology group, and a lot of his work is focused in this research area, investigating chemical messages between organisms. This has involved numerous projects on insect pheromones or host attractants, specifically for pest insects where these attractants can be used as lures for insect traps as part of pest monitoring or trapping strategies. This has included many pests both domestic and international such as Spotted Wing Drosophila, Vine Weevil, Rhinoceros Beetle, Tomato Bug and many more.
The second main aspect of Steven’s work at NRI is investigating innovative biopesticides against persistent crop pests, such as his work on the Fall Army Worm, an invasive pest in Africa and south-west Asia. Steven and the team tested the efficacy of combining a botanical insecticide and an entomopathogenic fungi against this pest which helps mitigate the drawbacks of these biopesticide when used in isolation.
Both of these research aspects play a role in integrated pest management strategies which is an important aspect of moving away from traditional synthetic chemical interventions and contributes to the NRI’s impact within sustainable agricultural intensification.
- Teaching Programmes:
Postgraduate:
- Agriculture for Sustainable Development, MSc.
- Biotechnology, MSc.
- Food Innovation, MSc.
- Food Safety and Quality Management, MSc.
- Global Environmental Change, MSc.
Undergraduate:
- Biology, BSc.
- Biomedical Science, BSc.
- Chemistry, BSc.
- Forensic Science, BSc.
- Forensics and Criminology, BSc.
- Human Health, BSc.
- Pharmaceutical Sciences, BSc.
- Research Projects:
FLYTHRIVE: Fly-led Yield Thriving in Horticulture with Integrated Vision and Ecology (PI, Innovate UK)
FLYTHRIVE is a collaborative project between Olombria, NIAB and NRI aimed to tackle rising insect pest infestations in common berry crops using advanced AI, natural lures and selected species of aphidophagous hoverflies to monitor the crop and trigger earlier intervention continuously.
Horticulture: Smart trap for improved early detection of vine weevil to enable successful application of integrated pest management (PI, BBSRC)
Vine weevils are a damaging pest for the both the horticulture and plant ornamental sectors. While population control is achieved through the application of nematodes this process is hindered by poor monitoring solutions. This limitation results in both unneeded applications and late applications of nematodes.
In collaboration with Harper Adams University, we have developed a “smart trap” solution to vine weevil monitoring. This trap has motion activated remote camera system with a semiochemical lure and a machine learning based algorithm for weevil detection.
Environmentally Benign Combination Biopesticides: Transforming Pest Control in Chinese and UK agriculture (Co-I, Innovate UK).
Due to issues with environmental contamination, pesticide resistance and non-target mortality the use of traditional pesticides worldwide has seen a reduction. In many cases these pesticides have been replaced with biopesticides. Botanical pesticides, such as pyrethrum, are known to be less toxic than their synthetic equivalents but degrade in UV light and thus offer shorter protection. Entomopathogenic Fungi is a fungus that infects insects and offers long term protection in the field but there is a lag time before they become effective.
To mitigate these issues, we combined both botanical insecticides and entomopathogenic fungi into one pest control solution to mitigate the drawbacks of using each individually (Harte et al, 2024).
Exploitation of interspecific signals to deter oviposition by spotted-wing drosophila (Co-I, BBSRC-IPA)
The invasive insect pest, spotted-wing drosophila (SWD) lays its eggs in soft fruit which hatch into larvae, feed on the fruit, causing fruit collapse and significant economic losses worldwide. Thus far SWD has evaded integrated pest management strategies and current control methods rely primarily on insecticide applications, which are not sustainable long-term solutions. In this project we showed that D. suzukii were deterred from laying eggs on artificial media exposed to egg laying Drosophila melanogaster, its sister species. This deterrent effect would prove invaluable for soft fruit growers if it could be replicated without the presence of the sister species. Through an exhaustive search we deduced that this signal did not appear to be solely chemical in nature and likely requires live microorganisms (Tungadi et al., 2022).
- Research Students:
PhD students:
- Deanna Mills (1st Supervisor)
- Safinatu Ameen (1st Supervisor)
- Asoo Yaji (2nd Supervisor)
- Cedric Maforimbo (2nd Supervisor)
- Francesca Amanesih (3rd Supervisor)
Completed:
- Louise Malmgren (3rd Supervisor)
- Greenwich Academic Literature Archive (GALA) link:
https://gala.gre.ac.uk/view/authors/6921.html
- Responsibilities:
- Postdoctoral Researcher
- Lecturer
- Co-Chair of the Faculty of engineering and Sciences
- Early career researcher representative for the NRI
- Awards:
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MRSC (Member of the Royal Society of Chemistry)
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MSCI (Member of the Society of Chemical Industry)
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MRES (Member of the Royal Entomological Society)
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FHEA (Fellow of the Higher Education Authority)
- External Profiles:
ORCID
https://orcid.org/0000-0001-9628-7912
LinkedIn
https://www.linkedin.com/in/steven-harte-56543745
Google Scholar
https://scholar.google.com/citations?user=SDgAgrwAAAAJ&hl=en
ResearcherID (WoS)
https://www.webofscience.com/wos/author/record/AAW-5652-2021
Research Gate
https://www.researchgate.net/profile/Steven-Harte/research
Academia
https://independent.academia.edu/StevenJHarte
Phone: +44 (0)1634 88 3955
Senior Lecturer in Chemical Ecology
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Katherine August
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- Qualifications:
PhD
- Biography:
I started at the university in January 2024 as a post-doctoral research fellow in the RodTickPathMan One Health project. The project investigates the link between grey squirrels, an invasive species in the UK, ticks and Lyme’s disease. I will focus on estimating the abundances of squirrels and other tick carriers using a range of field survey techniques but primarily camera traps.
Prior to this position, I completed my PhD at the University of Aberdeen (2018-2023) supervised by Prof Xavier Lambin (UoA), Dr Thomas Cornulier (Biomathematics and Statistics Scotland (BioSS)), Dr Nicholas Schurch (BioSS), Dr Philip Whitfield (Natural Research Ltd.) and Tom Dearnley (Forestry England). The project assessed the impact of persecution on the population dynamics of goshawks, a forest specialist bird of prey in the UK. I used a range of methods to do this, including field and laboratory work as well as complex statistical methods such as GAMMs and capture-mark-recapture models in a Bayesian framework. Additionally, I delved into the AI world and trained computer vision models to process and label the camera trap images I collected.
In addition to demonstrating on a range of practical and statistical courses at both undergraduate and postgraduate taught levels, I have also managed and lectured a final year undergraduate course titled Wildlife Conservation and Management. This included setting and marking written reports and presentations. I have also co-supervised honours and master’s level students.
In addition to traditional teaching, I have been heavily involved in groups which promote peer learning and development. In particular, I helped to run and hosted sessions with the Aberdeen Study Group who aim to promote knowledge exchange in a friendly setting, focussing primarily on statistics and coding.
- Selected Publications:
August K, Davison M, Bortoluzzi C, Wellcome Sanger Institute Tree of Life programme, Wellcome Sanger Institute Scientific Operations: DNA Pipelines collective, Tree of Life Core Informatics collective, Darwin Tree of Life Consortium. The genome sequence of the northern goshawk, Accipiter gentilis (Linnaeus, 1758) [version 1; peer review: 2 approved]. Wellcome Open Res 2022, 7:122 (doi:https://doi.org/10.12688/wellcomeopenres.17821.1)
- Research / Scholarly Interests:
My research interests centre on the impact that humans have on the ecology of UK species. My PhD research focussed on how persecution has impacted the population dynamics of goshawks, a medium-sized, forest specialist bird of prey, in the northern UK. I used a range of methods, including GAMs to identify spatially and temporally lagged effects of covariates on reproduction and used a Bayesian framework to assess factors affecting survival rates. Continuing to make use of new modelling applications to fully understand the impact humans are having on other species is crucial to helping halt the biodiversity crisis we face.
A large portion of the project involved deploying camera traps at nest sites to get colour ring recoveries. This led me to the world of AI and computer vision to attempt to identify individual unmarked goshawks. This field is rapidly expanding but it’s use in ecology is often limited due to a lack of expertise and time to learn. I will continue to help bridge the gap with my current research, applying computer vision models to UK mammalian species. I aim to identify ways in which ecologists can more easily access this new technology.
- External Profiles:
ORCID
https://orcid.org/0000-0001-6031-5117
Post Doctoral Research Fellow
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Lauren Farwell
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- Qualifications:
BSc, PhD
- Biography:
Dr Lauren Farwell joined NRI as a Postdoctoral Researcher in 2024. Her work focuses on investigating the ecology and diversity of plant pathogens, using novel monitoring and diagnostic techniques in the field and researching sustainable management strategies against such pathogens. Lauren is a member of NRI’s Agriculture, Health and Environment Department, working in the Plant Health and Postharvest Science research themes.
Before joining NRI, Lauren was a PhD student with Cranfield University in the Applied Mycology department, and was based at the Pest and Pathogen Ecology department at NIAB East Malling. While based at NIAB East Malling for four years, Lauren researched the epidemiology of Cladosporium on raspberry using sequencing to determine species present, field screens to determine fruit susceptibility, metabarcoding to assess the epicarp microbiome and performed field assays of biological control agents and resistant varieties to determine their efficacy. During her time at NIAB East Malling, Lauren also worked as a research technician, working on pathology and bio-stimulant experiments across various horticultural crops.
Lauren holds a BSc in Plant Science (University of Bristol) and a PhD on the epidemiology and management of Cladosporium on raspberry (Cranfield University in partnership with NIAB East Malling).
Lauren’s expertise includes pathogenicity assays, DNA barcoding, amplicon sequencing, biological control agent assays, airborne spore sampling and detection and the development of diagnostic assays.
- Selected Publications:
- Farwell, L.H., Papp-Rupar, M., Deakin, G., Magan, N. and Xu, X. (2024) Investigating the inoculum dynamics of Cladosporium on the surface of raspberry fruits and in the air. Environmental Microbiology, 26(3), pp. e16613. https://enviromicro-journals.onlinelibrary.wiley.com/doi/10.1111/1462-2920.16613?af=R
- Farwell, L.H., Deakin, G., Harris, A.L., Passey, T., Verheecke-Vaessen, C., Magan, N. and Xu, X. (2023) Cladosporium Species: The Predominant Species Present on Raspberries from the U.K. and Spain and Their Ability to Cause Skin and Stigmata Infections. Horticulturae, 9(2), pp. 128. https://doi.org/10.3390/horticulturae9020128
- Research / Scholarly Interests:
Lauren is a plant pathologist specialising in the study of emerging horticultural pathogens to aid in disease diagnostics, monitoring and control. Her core research interests are fungi and oomycetes, but she also has interest in bacterial pathogens. Lauren has interest in pathosystems across horticulture, including fungi such as Botrytis, Cladosporium, Rhizopus, Mucor, Colletotrichum and Alternaria¸ and oomycete pathogens such as Phytophthora and Pythium.
Lauren’s research interests span fundamental and applied science, asking how pathogens have evolved adaptations to infect their host, how to monitor the inoculum of these pathogens on their hosts and in the air, and then subsequently how to manage these pathogens in the field.
Lauren will be using comparative genomics to determine loci important for pesticide resistance to aid in the monitoring of resistant pathogens in the field.
- Research Projects:
An enhanced toolkit for Botrytis control in protected cropping | BBSRC PACE Horticulture | PDRA | 2024 – 2028
This research aims to develop an advanced toolbox for precision monitoring and integrated disease management of Botrytis in protected strawberry.
To do this, we will be surveying the genomes of Botrytis isolates to investigate characteristics such as fungicide resistance, and understanding how species have co-evolved with their hosts. We will be continuing the development of in-field diagnostic tools to detect subspecific variants of Botrytis. We will also search for new genetic sources of Botrytis resistance in cultivated and wild strawberries, and finally assess the efficacy and persistence of biological controls to manage Botrytis infections in the field.
- Awards:
Student Prize from the Worshipful Company of Fruiterers 2023
- External Profiles:
ORCID
https://orcid.org/0000-0003-4918-8588
LinkedIn
https://www.linkedin.com/in/lauren-farwell-2ba58116b
ResearchGate
https://www.researchgate.net/profile/Lauren-Farwell
Postdoctoral Research Fellow in Molecular Plant Pathology
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Wezi Mkwaila
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Research Technician - Molecular Biology and Microbiology
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John Cooper
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- Qualifications:
BSc (Hons), CCHem, MRSC
- Biography:
John has over thirty years of experience working as an analytical chemist, primarily within UKAS 17025 accredited laboratories. He has worked within the food enforcement sector analysing samples submitted by bodies such as Trading Standards and Port Health Authorities. He has spent five years establishing and developing a quality control/research laboratory for a successful private company within the global beer industry before moving to the Natural Resources Institute in September 2024.
In addition to food analysis experience, John brings knowledge from other sectors as diverse as pharmaceuticals (specifically cannabis) and forensic explosives.
He is fully conversant with traditional wet chemistry techniques and the latest analytical instrumentation, using both to generate accredited analytical methods of analysis.
Laboratory Coordinator
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Vijay Mane
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Research Technician - Molecular Biology and Microbiology
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Tafadzwa Mkungunugwa
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Laboratory Technical & Business Support
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Adrian Barnett
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Senior Lecturer in Behavioural Ecology
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